Explorable                          Microscopy                          Bringing gigapixel imagery to the micro scaleThurs...
Changing the way                              you seeThursday, July 28, 2011
GigaPans are from mars                           (Venus is too cloudy for pictures)Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Scanning Electron    MicroscopeThursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Context and detailThursday, July 28, 2011
Thursday, July 28, 2011
An eye lash next to a dried blood sample                          (intern blood - Molly has turned out to                 ...
Thursday, July 28, 2011
Thursday, July 28, 2011
Eutetramorium                                                            mocquerysi                          http://www.gi...
Thursday, July 28, 2011
Snow AlgaeThursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Assorted PollenThursday, July 28, 2011
137045 Views                          Mentioned on                          New Scientist BlogThursday, July 28, 2011
400 Images, 280 Megapixels, 287,000 Views!Thursday, July 28, 2011
Over 500,000 views of ants!                          When people can explore GigaPans                                     ...
Sweeter than Ants                                                         Text From left to right the sweeteners are Equal...
Adapt MicroscopesThursday, July 28, 2011
Imaging the Imager                                               •CCD from a Canon                                        ...
Test/Calibration Area                            Pixels!Thursday, July 28, 2011
Flea by  Jay Longson  5,640 imagesThursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Gene Cooper                          http://GigaMacro.com                          Large Mosaic + Focus Stalking =        ...
Thursday, July 28, 2011
Thursday, July 28, 2011
 Passion Butterfly                           1,790 individual photographs                           1.37 gigapixelsThur...
 Passion Butterfly                           1,790 individual photographs                           1.37 gigapixelsThur...
Thursday, July 28, 2011
Bees            Bee Frame test http://gigapan.org/gigapans/fullscreen/80976/Thursday, July 28, 2011
Bees       Bee Frame test http://gigapan.org/gigapans/fullscreen/80976/Thursday, July 28, 2011
Bees       Bee Frame test http://gigapan.org/gigapans/fullscreen/80976/Thursday, July 28, 2011
Bees       Bee Frame test http://gigapan.org/gigapans/fullscreen/80976/Thursday, July 28, 2011
Bees       Bee Frame test http://gigapan.org/gigapans/fullscreen/80976/Thursday, July 28, 2011
Time Lapse Bees - Bleeding Edge      http://timemachine.gigapan.org/wiki/BeesThursday, July 28, 2011
MakerBot as ImagerThursday, July 28, 2011
MakerBot as ImagerThursday, July 28, 2011
MakerBot as ImagerThursday, July 28, 2011
MakerBot as ImagerThursday, July 28, 2011
MakerBot as ImagerThursday, July 28, 2011
Crab Shell - 200 megapixels, focus stacked, 1,560 imagesThursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
one thing.Thursday, July 28, 2011
You. Now.Thursday, July 28, 2011
Overview           What we are doing           Devices           Tools and process           Presentation, interaction...
Scale Independent, Explorable ImagesThursday, July 28, 2011
Different Scales       Textile full image by Surangi - 110 megapixels http://gigapan.org/gigapans/64710/Thursday, July 28,...
Focus Stacking      ImageJ http://rsbweb.nih.gov/ij/       - “Like weaponized photoshop” Dan Kaminsky      Extended Dept...
Focus StackingThursday, July 28, 2011
Focus StackingThursday, July 28, 2011
Focus StackingThursday, July 28, 2011
12 Bits                          Fitz:                          Do you want your                          board back now?T...
Focus Stacking - CalibrationThursday, July 28, 2011
Focus Stacking - HD Video      Resolve 0.5 microns with a 40x objective.      1080 HD Video = 29.97two megapixel images ...
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Microscope Adapter KitThursday, July 28, 2011
Poor OrphansThursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Low cost MacroThursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Thursday, July 28, 2011
Devices           NanoGigapan           MacroBot           Jay’s scope at NASA           Microscope Adapter Kit      ...
Presentation/Interaction      Large images, raw mode, tif           GigaPan site           PS2 controller, demo       ...
Platform for Gigapixel Applications      Macro invertebrates http://www.mcaulifferegional.org/Expedition/bioticindex.html...
Best practices     in using Gigapixel Imagery for Science      Provide Full Context      Disclosure      - Time of acqui...
Best practices     in using Gigapixel Imagery for Science        Provide unprocessed imagesThursday, July 28, 2011
Best practices     in using Gigapixel Imagery for ScienceThursday, July 28, 2011
When is the next Where.           Explore and see what you find           timelapse gigapans           Time series and ...
Thursday, July 28, 2011
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Explorable Microscopy OSCon Talk 7/28/11

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Explorable Microscopy OSCon Talk 7/28/11

  1. Explorable Microscopy Bringing gigapixel imagery to the micro scaleThursday, July 28, 2011
  2. Changing the way you seeThursday, July 28, 2011
  3. GigaPans are from mars  (Venus is too cloudy for pictures)Thursday, July 28, 2011
  4. Thursday, July 28, 2011
  5. Thursday, July 28, 2011
  6. Thursday, July 28, 2011
  7. Scanning Electron MicroscopeThursday, July 28, 2011
  8. Thursday, July 28, 2011
  9. Thursday, July 28, 2011
  10. Context and detailThursday, July 28, 2011
  11. Thursday, July 28, 2011
  12. An eye lash next to a dried blood sample (intern blood - Molly has turned out to be useful) Red blood cellsThursday, July 28, 2011
  13. Thursday, July 28, 2011
  14. Thursday, July 28, 2011
  15. Eutetramorium mocquerysi http://www.gigapan.org/gigapans/28734/Thursday, July 28, 2011
  16. Thursday, July 28, 2011
  17. Snow AlgaeThursday, July 28, 2011
  18. Thursday, July 28, 2011
  19. Thursday, July 28, 2011
  20. Thursday, July 28, 2011
  21. Assorted PollenThursday, July 28, 2011
  22. 137045 Views Mentioned on New Scientist BlogThursday, July 28, 2011
  23. 400 Images, 280 Megapixels, 287,000 Views!Thursday, July 28, 2011
  24. Over 500,000 views of ants! When people can explore GigaPans Text they (sometimes) start to care.Thursday, July 28, 2011
  25. Sweeter than Ants Text From left to right the sweeteners are Equal (dextrose, maltodextrin, and aspartame), Splenda (dextrose, maltodextrin, and sucralose), Sugar in the raw, and regular table sugar.Thursday, July 28, 2011
  26. Adapt MicroscopesThursday, July 28, 2011
  27. Imaging the Imager •CCD from a Canon Powershot at 1000x. •170 individual photographs •380 megapixelsThursday, July 28, 2011
  28. Test/Calibration Area Pixels!Thursday, July 28, 2011
  29. Flea by Jay Longson 5,640 imagesThursday, July 28, 2011
  30. Thursday, July 28, 2011
  31. Thursday, July 28, 2011
  32. Thursday, July 28, 2011
  33. Gene Cooper http://GigaMacro.com Large Mosaic + Focus Stalking = Huge numbers of images!Thursday, July 28, 2011
  34. Thursday, July 28, 2011
  35. Thursday, July 28, 2011
  36.  Passion Butterfly  1,790 individual photographs  1.37 gigapixelsThursday, July 28, 2011
  37.  Passion Butterfly  1,790 individual photographs  1.37 gigapixelsThursday, July 28, 2011
  38. Thursday, July 28, 2011
  39. Bees  Bee Frame test http://gigapan.org/gigapans/fullscreen/80976/Thursday, July 28, 2011
  40. Bees Bee Frame test http://gigapan.org/gigapans/fullscreen/80976/Thursday, July 28, 2011
  41. Bees Bee Frame test http://gigapan.org/gigapans/fullscreen/80976/Thursday, July 28, 2011
  42. Bees Bee Frame test http://gigapan.org/gigapans/fullscreen/80976/Thursday, July 28, 2011
  43. Bees Bee Frame test http://gigapan.org/gigapans/fullscreen/80976/Thursday, July 28, 2011
  44. Time Lapse Bees - Bleeding Edge  http://timemachine.gigapan.org/wiki/BeesThursday, July 28, 2011
  45. MakerBot as ImagerThursday, July 28, 2011
  46. MakerBot as ImagerThursday, July 28, 2011
  47. MakerBot as ImagerThursday, July 28, 2011
  48. MakerBot as ImagerThursday, July 28, 2011
  49. MakerBot as ImagerThursday, July 28, 2011
  50. Crab Shell - 200 megapixels, focus stacked, 1,560 imagesThursday, July 28, 2011
  51. Thursday, July 28, 2011
  52. Thursday, July 28, 2011
  53. Thursday, July 28, 2011
  54. Thursday, July 28, 2011
  55. Thursday, July 28, 2011
  56. one thing.Thursday, July 28, 2011
  57. You. Now.Thursday, July 28, 2011
  58. Overview  What we are doing  Devices  Tools and process  Presentation, interaction  Gigapixel imagery as Platform  Exploring Time SeriesThursday, July 28, 2011
  59. Scale Independent, Explorable ImagesThursday, July 28, 2011
  60. Different Scales Textile full image by Surangi - 110 megapixels http://gigapan.org/gigapans/64710/Thursday, July 28, 2011
  61. Focus Stacking  ImageJ http://rsbweb.nih.gov/ij/ - “Like weaponized photoshop” Dan Kaminsky  Extended Depth of Field Plugin for ImageJ - http://bigwww.epfl.ch/demo/edf/  Zerene Stacker (commercial, but good) http://www.zerenesystems.com/  http://en.wikipedia.org/wiki/Focus_stackingThursday, July 28, 2011
  62. Focus StackingThursday, July 28, 2011
  63. Focus StackingThursday, July 28, 2011
  64. Focus StackingThursday, July 28, 2011
  65. 12 Bits Fitz: Do you want your board back now?Thursday, July 28, 2011
  66. Focus Stacking - CalibrationThursday, July 28, 2011
  67. Focus Stacking - HD Video  Resolve 0.5 microns with a 40x objective.  1080 HD Video = 29.97two megapixel images per second.  Split the frames - qt tools by david van brink - http://omino.com/sw/qt_tools/  Normal Focus stackingThursday, July 28, 2011
  68. Thursday, July 28, 2011
  69. Thursday, July 28, 2011
  70. Thursday, July 28, 2011
  71. Thursday, July 28, 2011
  72. Thursday, July 28, 2011
  73. Thursday, July 28, 2011
  74. Thursday, July 28, 2011
  75. Microscope Adapter KitThursday, July 28, 2011
  76. Poor OrphansThursday, July 28, 2011
  77. Thursday, July 28, 2011
  78. Thursday, July 28, 2011
  79. Thursday, July 28, 2011
  80. Thursday, July 28, 2011
  81. Low cost MacroThursday, July 28, 2011
  82. Thursday, July 28, 2011
  83. Thursday, July 28, 2011
  84. Thursday, July 28, 2011
  85. Devices  NanoGigapan  MacroBot  Jay’s scope at NASA  Microscope Adapter Kit  Low Cost Macro  MakerBotThursday, July 28, 2011
  86. Presentation/Interaction  Large images, raw mode, tif  GigaPan site  PS2 controller, demo  Modest Maps viewer  TMS tiles, open layers  Share, explore, work with the imagesThursday, July 28, 2011
  87. Platform for Gigapixel Applications  Macro invertebrates http://www.mcaulifferegional.org/Expedition/bioticindex.html  GigaPan feature annotation tool Thursday, July 28, 2011
  88. Best practices in using Gigapixel Imagery for Science  Provide Full Context  Disclosure - Time of acquisition - True color, color calibration - Scale: tools for measuring scale - Number of images, resolution  Raw images: focus stacking and stitching can introduce artifacts. For computational photography the raw images are the data.Thursday, July 28, 2011
  89. Best practices in using Gigapixel Imagery for Science Provide unprocessed imagesThursday, July 28, 2011
  90. Best practices in using Gigapixel Imagery for ScienceThursday, July 28, 2011
  91. When is the next Where.  Explore and see what you find  timelapse gigapans  Time series and tiles  Snacking  ParticulatesThursday, July 28, 2011
  92. Thursday, July 28, 2011
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