Wheat Rust Toolbox Related to New Initiatives on Yellow Rust
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Wheat Rust Toolbox Related to New Initiatives on Yellow Rust

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Jens Grønbech Hansen & Poul Lassen, Aarhus University, DK

Jens Grønbech Hansen & Poul Lassen, Aarhus University, DK

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Wheat Rust Toolbox Related to New Initiatives on Yellow Rust Wheat Rust Toolbox Related to New Initiatives on Yellow Rust Presentation Transcript

  • Wheat Rust Toolbox Related to New Initiatives on Yellow Rust
    Jens Grønbech Hansen & Poul Lassen, Aarhus University, DK
    INTERNATIONAL WHEAT STRIPE RUST SYMPOSIUM, ICARDA, ALEPPO, SYRIA 18-20 APRIL 2011
  • Outline:
    Wheat Rust Toolbox Related to New Initiatives on Yellow Rust
    Jens Grønbech Hansen & Poul Lassen, Aarhus University, DK
    • History and framework
    • Achievements so far
    • Experiences from www.eurowheat.org
    • Visions and contribution to a new Yellow Rust Initiative
    INTERNATIONAL WHEAT STRIPE RUST SYMPOSIUM, ICARDA, ALEPPO, SYRIA 18-20 APRIL 2011
  • Team members
    INTERNATIONAL WHEAT STRIPE RUST SYMPOSIUM, ICARDA, ALEPPO, SYRIA 18-20 APRIL 2011
  • Wheat Rust Toolbox
    Jens G. Hansen & Poul Lassen, Aarhus University, Denmark
    Department of Agroecology & Environment
    AU main Campus
    GRRC
    Research Centre Foulum
  • Examples from EuroWheat
    Wheat Rust Toolbox Related to New Initiatives on Yellow Rust
    Jens Grønbech Hansen & Poul Lassen, Aarhus University, DK
    INTERNATIONAL WHEAT STRIPE RUST SYMPOSIUM, ICARDA, ALEPPO, SYRIA 18-20 APRIL 2011
  • Example from EuroWheat: race analysis
    Wheat Rust Toolbox Related to New Initiatives on Yellow Rust
    Jens Grønbech Hansen & Poul Lassen, Aarhus University, DK
    INTERNATIONAL WHEAT STRIPE RUST SYMPOSIUM, ICARDA, ALEPPO, SYRIA 18-20 APRIL 2011
  • Example from EuroWheatabout YR IPM
    Wheat Rust Toolbox Related to New Initiatives on Yellow Rust
    Jens Grønbech Hansen & Poul Lassen, Aarhus University, DK
    INTERNATIONAL WHEAT STRIPE RUST SYMPOSIUM, ICARDA, ALEPPO, SYRIA 18-20 APRIL 2011
  • Global Rust framework
    Wheat Rust Toolbox Related to New Initiatives on Yellow Rust
    Jens Grønbech Hansen & Poul Lassen, Aarhus University, DK
    INTERNATIONAL WHEAT STRIPE RUST SYMPOSIUM, ICARDA, ALEPPO, SYRIA 18-20 APRIL 2011
  • Wheat Rust Toolbox IT Framework
    GRRC
    Wheat rust
    tolbox
    EucaBlight
    EuroBlight
    EuroWheat
    Models and applicationslayer
    Exchange and integration
    withexternal platforms
    SQL Databases: CropProblem etc.
    (XML)
    INTERNATIONAL WHEAT STRIPE RUST SYMPOSIUM, ICARDA, ALEPPO, SYRIA 18-20 APRIL 2011
  • Monitoring information in
    RustSPORE
    (calculatedpathotypes summary data
    country/year)
    INTERNATIONAL WHEAT STRIPE RUST SYMPOSIUM, ICARDA, ALEPPO, SYRIA 18-20 APRIL 2011
  • Yellow rust
    epidemic
    2010
  • N = 13
    N = 56
    N = 62
    N = 47
    N = 39
    N = 16
    N = 93
    N = 218
    N = 83
    N = 92
    N = 34
    Issues for discussion:
    Surveystrategy
    Qulity af data/training
    Timeliness
    Sampling strategy
    Use for regional warning
    N = 25
    N = 356
    N = 24
    N = 27
  • Dataflow from fieldsurvey to the wheat rust toolbox to RustSpore at FAO
    Field survey
    Data entry web form
    AU database
    UnPublic
    Public
    Qualitycontrol by FAO
    Mapping
    Mapping
    XML
  • ToolboxActivities in 2011
    Wheat Rust Toolbox Related to New Initiatives on Yellow Rust
    Jens Grønbech Hansen & Poul Lassen, Aarhus University, DK
    • Enhance and test the online surveillance system for the threewheat rusts
    • Surveillance and pathotype data -> wheat Rust Toolbox -> RustMapper. One data entry point/ qualitycontrol
    • non-European yellow rust data (GRRC) into the database.
    • Single R gene and combined R gene virulence query mapping tool
    • Prepare the handling of raw data of stem rust and yellow rust virulences
    • Prepare the inclusion of molecular data.
    INTERNATIONAL WHEAT STRIPE RUST SYMPOSIUM, ICARDA, ALEPPO, SYRIA 18-20 APRIL 2011
  • The Wheat Rust Toolbox– Opportunities for a new yellow rust initiative
    Wheat Rust Toolbox Related to New Initiatives on Yellow Rust
    Jens Grønbech Hansen & Poul Lassen, Aarhus University, DK
    Surveillance: Enhance the online surveillance system for earlywarning – all wheat rusts (FAO +).
    Wheat host: Include Trap Nursery data (all rusts) into the database - Wheat Rust Nursery Data Information System (ICARDA/CIMMYT +)
    Pathogen: Interactive Genotype AnalysingToolcombiningpathogengenotypic and -phenotypic data (dynamicnaming system) (GRRC, DRRW partners, +=). We did that for potatolateblight
    Epidemicrisk analyses: Combine the host and the pathogen data enablingus to predictabout the future.
    Networking: Improve the integration of data and interactivetoolswithexisting partner information systems, e.g., FAO, Rust Mapper (CIMMYT +), ICARDA tools etc.
    INTERNATIONAL WHEAT STRIPE RUST SYMPOSIUM, ICARDA, ALEPPO, SYRIA 18-20 APRIL 2011