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Herbarium management multiple-taxonomies-20130227_istc_tervuren

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  • 1. Herbarium Management :--: Multiple Taxonomies CETAF / ISTC - Tervuren / 2013-02-2
  • 2. General Thoughts History / Structure / Size of Herbarium Collection(s) Activities of internal staff (few K pa) purpose driven activities (specific coll.) random (general coll.) Acquisition of material from external sources personal herbaria (few K to 1 M) exchange of material (few K) Acquisition of abandoned institutions (few 10K) Merging of institutions / collections ( parallel worlds ) CETAF / ISTC - Tervuren / 2013-02-2
  • 3. General Thoughts Purpose and Value of a Herbarium Collection Voucher material – Verification possible Basis for Floristic and Taxonomic work Historical evidence Nomenclatural acts CETAF / ISTC - Tervuren / 2013-02-2
  • 4. General Thoughts Collaborative / Integrative / Open approach virtualized data reusable for others Lookup tables ( webservices ) for Person Names, incl. min. biographic data Geographic Names Scientific Names, incl. Common Name representations Classification Systems / Taxonomies ( publications / webservices ) Data-Output via standard routes (rdf, xml, kml / ABCD, DwC, ESE, EDM) CETAF / ISTC - Tervuren / 2013-02-2
  • 5. issues Taxonomy / Synonymy old vs. current(ly used) names and taxonomic concepts incongruent taxonomies Systems / Taxonomies available online PL / Tropicos / APweb / Euro+Med / FEu / MycoB / IFung / AlgaeB / CoL / analog Systems available infinite CETAF / ISTC - Tervuren / 2013-02-2
  • 6. filing issues finding specimens Arabidopsis thaliana / Cardaminopsis thaliana / basionym: Arabis thaliana Arrangement of specimens Annotation on specimens CETAF / ISTC - Tervuren / 2013-02-2
  • 7. CETAF / ISTC - Tervuren / 2013-02-2
  • 8. simplified data modeldet. actor / person / team institution / collectiontype specimen names taxonomic backbone geographic reference protologues monographs revisions floras article-level (G)UID reference outside local db (IPNI, IF, PL; HUH; geonames, BHL) CETAF / ISTC - Tervuren / 2013-02-2
  • 9. Building Services Motivation Virtual dynamic arrangement and analyses of Collections Poaceae Types Flora Projects ( Flora of Austria, Flora Iranica ) / native GBIF Austria / Synonymy Creation of Hierarchy at any rank Flora of Austria backbone CETAF / ISTC - Tervuren / 2013-02-2
  • 10. Online Resources Classifications / Taxonomies https://131.130.131.9/output/classificationBrowser.php YII framework / service based architecture Leverage http://www.gbif.at/index.php?id=4552 CETAF / ISTC - Tervuren / 2013-02-2
  • 11. Open Questions Services persistent availability of external services caching vs. Incorporating of „used“ data GUIDs Data persistent availability of external services complementing DataStores forking / propagating Content Standards TDWG / CIDOC - CRM CETAF / ISTC - Tervuren / 2013-02-2
  • 12. Open Questions Filing Update or Conservative CETAF / ISTC - Tervuren / 2013-02-2