Calit2 - CSE's Living Laboratory for Applicationse

Slide 1: Calit2 - CSE's Living Laboratory for Applications UCSD CSE 91 - Perspectives in Computer Science (Fall 2007) Calit2@ UCSD November 8, 2007 Dr. Larry Smarr Director, California Institute for Telecommunications and Information Technology Harry E. Gruber Professor, Dept. of Computer Science and Engineering Jacobs School of Engineering, UCSD

Slide 2: California’s Institutes for Science and Innovation A Bold Experiment in Collaborative Research California Institute for Bioengineering, Biotechnology, and Quantitative Biomedical Research Center for Information Technology Research UCD in the Interest of Society UCM UCB UCSF California UCSC NanoSystems Institute UCSB California Institute for UCLA Telecommunications and UCI Information Technology UCSD www.ucop.edu/california-institutes

Slide 3: Scenarios in This New World • Customized medical care based on genotype plus real-time vital signs • Intelligent transportation systems to enable efficient traffic flow • Real-time environmental data collection to inform decision making and policy setting • Vast networked gaming environments in which to learn, communicate, work • Digital entertainment networks, CineGrid These scenarios are all based on… - integrated systems of underlying technologies - applied to real-world problems - affecting California’s economy and quality of life Source: Warren Miller, New Yorker, April 11, 1988

Slide 4: What Is Calit2? • Research on the Future of the Internet and its Transformation of Our Society • Core Partnership Between UCSD and UCI – Several Hundred Faculty – Alliances With Other Campuses • Prototyping Of Infrastructure Through “Living Laboratories” – From Campus to Planetary Scale – Partnerships With Multiple Levels of Government and Industry – Secret Sauce: Technical Professionals to Move Projects Forward • Multidisciplinary Research Teams – Faculty, Postdocs, Staff, Students – Industry Partners – – From Giants to Start-up Companies – Community Partners – Emergency Responders Jerry Sheehan, Calit2 is Followup Person jerry@ucsd.edu

Slide 5: Advanced Multimedia Facilities Synthesis Center • Audio Spatialization • Motion Capture • Gaming Lab High Definition Studio

Slide 6: Laboratories Millimeter Wave Microwave/PA Circuit Assembly Smart Room Laboratories  Millimeter Wave  Microwave/PA  Circuits  Photonics

Slide 7: Funded Projects OptIPuter / NSF WIISARD / NIH RESCUE / NSF CAMERA / Moore Foundation

Slide 8: The Center for Networked Systems Technologies and Frameworks for Robust, Secure, and Open Networked Systems Research Member Companies Interests Diverse Research Projects -Multiple faculty Center Faculty -Multiple students Project -Multidisciplinary Proposals -CNS Research Theme

Slide 9: Calit2 CalRADIO Smart Radio Hardware/Software Teaching & Research Platform • CalRADIO-I – Digital Signaling Processor + ARM Application – Operating System Presentation – RF WiFi (802.11x) Chip Set – MAC Functionality into 'C' Code Session layer – A Test Instrument, An Access Point, And A WiFi Client Transport • CalRADIO-II Network layer – Gather Requirements and Specifications Link layer – Layer 1 to Layer 7 Software Access – Several RF Front-End Modules Physical – 802.11x layer – 802.16 – Cell General Development Platform – General RF For Physical to Application Layers of Wireless Design http://research.calit2.net/calradio/

Slide 10: Calit2 Brings Computer Scientists and Engineers Together with Biomedical Researchers • Some Areas of Concentration: – Algorithmic and System Biology – Metagenomics – Cancer Genomics – Human Genomic Variation and Disease – Proteomics – Mitochondrial Evolution – Computational Biology – Multi-Scale Cellular Imaging UC Irvine – Information Theory and Biological Systems UC Irvine – Telemedicine UC San Diego

Slide 11: In Spite of the Bubble Bursting, Calit2 Has Partnered with over 130 Companies More Than 80 Have Provided Funds or In-kind 100000000 Dollars Received Per Company 10000000 Broad Range of Companies 1000000 100000 10000 1000 0 20 40 60 80 Rank Over $80 Million From Industry So Far Industrial Partners > $1 Million

Slide 12: Ericsson: A Calit2 Industrial Partner with Breadth and Depth • Sponsored Research: Non-Exclusive Royalty Free – $ 6.2 Million with UC Discovery Match – 17 Professors, 17 Students, 4 Post-docs • 27 Student Fellowships • Two Endowed Chairs; Two Faculty Fellowships • Collaborations – Magnus Almgren: Taught Course in ECE – Jaap Harsten, Bluetooth Hands-On Course • Infrastructure – Base Stations, Always Best Connected • Help with – New Federal Grants: $22.5 Million Ericsson – Inspired Two Startups Microlink UCSD

Slide 13: Broadband Depends on Where You Are • Mobile Broadband – 0.1-0.5 Mbps 100,000 Fold Range All Here Today! • Home Broadband – 1-5 Mbps “The future is already here, it’s just not evenly distributed” William Gibson, Author of Neuromancer • University Dorm Room Broadband – 10-100 Mbps • Calit2 Global Broadband – 1,000-10,000 Mbps

Slide 14: Borderless Collaboration Between Global University Research Centers at 10Gbps Maxine Brown, Tom DeFanti, Co-Chairs iGrid 2005 TH E GL OBAL LAMBDA INTEGRATED FACILITY www.igrid2005.org September 26-30, 2005 Calit2 @ University of California, San Diego California Institute for Telecommunications and Information Technology 100Gb of Bandwidth into the Calit2@UCSD Building More than 150Gb GLIF Transoceanic Bandwidth! 450 Attendees, 130 Participating Organizations 20 Countries Driving 49 Demonstrations 1- or 10- Gbps Per Demo

Slide 15: First Trans-Pacific Super High Definition Telepresence Meeting Using Digital Cinema 4k Streams Streaming 4k 100 Times with JPEG 2000 Compression the Resolution ½ gigabit/sec of YouTube! Lays Technical Basis for Global Keio University Digital President Anzai Cinema Sony UCSD NTT Chancellor Fox SGI

Slide 16: CineGrid @ iGrid2005: Six Hours of 4K Projected in Calit2 Auditorium 4K Distance Learning 4K Virtual Reality 4K Scientific Visualization 4K Anime 4K Digital Cinema Source: Laurin Herr

Slide 17: Remote Interactive High Definition Video of Deep Sea Hydrothermal Vents Canadian-U.S. Collaboration Source John Delaney & Deborah Kelley, UWash

Slide 18: e-Science Collaboratory Without Walls Enabled by Uncompressed HD Telepresence 1500 Mbits/sec Calit2 to UW Research Channel Over NLR May 23, 2007 John Delaney, PI LOOKING, Neptune Photo: Harry Ammons, SDSC

Slide 19: Federal Agencies Have Funded $350 Million to Over 300 Calit2 Affiliated Grants 50 Grants OptIPuter Over $1 Million Broad Distribution of Medium and Small Grants Creating a Rich Ecology of Basic Research Federal Agency Source of Funds

Slide 20: The OptIPuter Project: Creating High Resolution Portals Over Dedicated Optical Channels to Global Science Data Scalable Adaptive Graphics Environment (SAGE) $13.5M Over Five Years Picture Source: Mark Ellisman, David Lee, Jason Leigh Calit2 (UCSD, UCI) and UIC Lead Campuses—Larry Smarr PI Univ. Partners: SDSC, USC, SDSU, NW, TA&M, UvA, SARA, KISTI, AIST Industry: IBM, Sun, Telcordia, Chiaro, Calient, Glimmerglass, Lucent

Slide 21: 3D OptIPortals: Calit2 StarCAVE and Varrier Alpha Tests of Telepresence “Holodecks” Connected at 20 Gb/s to CENIC, NLR, GLIF 15 Meyer Sound Speakers + Subwoofer 30 HD Projectors! Passive Polarization-- Optimized the Polarization Separation and Minimized Attenuation Source: Tom DeFanti, Greg Dawe, Calit2 Cluster with 30 Nvidia 5600 cards-60 GB Texture Memory, Renders Images 3,200 Times the Speed of Single PC

Slide 22: Marine Genome Sequencing Project – Measuring the Genetic Diversity of Ocean Microbes Plus 155 Marine Microbial Each Sample Genomes ~2000 Specify Microbial Ocean Data Species Sorcerer II Data Will Double Number of Proteins in GenBank!

Slide 23: Calit2’s Direct Access Core Architecture Creates a SuperNetwork Metagenomics Server Sargasso Sea Data Sorcerer II Expedition Dedicated (GOS) Compute Farm Traditional User (1000s of CPUs) JGI Community W E B PORTAL Sequencing Project + Web Services Moore Marine Data- Request 10 GigE Microbial Project Base Fabric Response Farm NASA and NOAA Local Satellite Data Environment Flat File Community Microbial Direct Server Web Metagenomics Data Access Farm Lambda (other service) Cnxns Local Cluster TeraGrid: Cyberinfrastructure Backplane (scheduled activities, e.g. all by all comparison) (10,000s of CPUs) Source: Phil Papadopoulos, SDSC, Calit2

Slide 24: “Instant” Global Microbial Metagenomics CyberCommunity Over 1300 Registered Users From 48 Countries USA 761 United Kingdom 64 Germany 54 Canada 46 France 44 Brazil 33

Slide 25: An Emerging High Performance Collaboratory for Microbial Metagenomics UW OptIPortals UMich NW! UIC EVL MIT UC Davis JCVI UCI SIO UCSD SDSU OptIPortal CICESE

Slide 26: Transitioning to the “Always-On” Mobile Internet Cellular + WiFi http://www.etforecasts.com/products/ES_intusersv2.htm

Slide 27: NSF-Funded ResponSphere Establishes Calit2 Project Rescue Testbeds in Irvine and in San Diego • Gaslamp Quarter, San Diego/UCSD – Ubiquitous Wireless Coverage in Downtown San Diego – Test Network Architecture Enhancement and New Applications • Crisis Assessment, Mitigation, And Analysis – UCI Campus – Field-Test and Refine Research on Information Collection, Analysis, Sharing, and Dissemination in Controlled yet Realistic Settings Alex Hubenko Project Manager, RESCUE, ResponSphere www.responsphere.org

Slide 28: NSF RESCUE Strongly Coupled with NIH WIISARD Grant Wireless Internet Information System for Medical Response in Disasters Calit2 is Working Closely with the First Responder Community Les Lenert, UCSD PI Triage First Tier 802.11 pulse ox Reality Flythrough Mobile Video Mid Tier Wireless Networks Command Center

Slide 29: Calit2’s WIISARD Project Has Innovatived Wireless Systems to Support SoCal First Responders Aug. 22, 2006 MMST Disaster Drill at Calit2@UCSD Involved Over 200 First Responders

Slide 30: Accelerator: The Perfect Storm-- Convergence of Engineering with Bio, Physics, & IT HP 1000x MemorySpot Magnification 2 mm 400,000 x ! 2 micron DNA-Conjugated Microbeads IBM Quantum Corral 400x Iron Atoms on Copper Magnification 5 nanometers Human Adenovirus Nanobioinfotechnology

Slide 31: Calit2 Materials and Devices Laboratory: Nano3 Facility “Nano3” – Science, Engineering, Medicine CALIT2.UCSD 10,000 sq. feet Materials and Devices Labs Class 100/1000 Nearly 50 Academic Projects Source: Bernd Fruhberger, Calit2

Slide 32: A World of Distributed Sensors Starts with Integrated Nanosensors MURI for Nanostructured Supersensors Developing Multiple Nanosensors on a Single Chip, Integrated with Local Processing 2006 and Wireless Communications Fluidic circuit Guided wave Free space optics optics Aqueous Physical Gas/chemical bio/chem sensors sensors sensors Electronics (communication, powering) Ivan Schuller holding the first prototype in 2004 Technology Transfer: RedX (Explosive Sensors), RheVision (Fauvation Optics) I. K. Schuller, A. Kummel, M. Sailor, W. Trogler, Y-H Lo

Slide 33: President Kalam of India Believes Nanobioinfotech is the Future for 600,000 Villages • Interactive Knowledge System • Convergence of Info- Nano - Bio • Make the Bandwidth Available with No Limits • PURA--Societal Grid With Electronic Connection of a Billion People Photo: Alan Decker, UCSD