Calit2 - CSE's Living Laboratory  for Applications UCSD CSE 91 - Perspectives in Computer Science (Fall 2007)  Calit2@ UCS...
California’s Institutes for Science and Innovation  A Bold Experiment in Collaborative Research California  NanoSystems In...
Scenarios in This New World <ul><li>Customized  medical care  based on genotype plus real-time vital signs </li></ul><ul><...
What Is Calit2? <ul><li>Research on the Future of the Internet and  its Transformation of Our Society </li></ul><ul><li>Co...
Advanced Multimedia Facilities High Definition Studio <ul><li>Audio Spatialization </li></ul><ul><li>Motion Capture </li><...
<ul><li>Laboratories </li></ul><ul><li>Millimeter Wave </li></ul><ul><li>Microwave/PA </li></ul><ul><li>Circuit Assembly <...
Funded Projects OptIPuter / NSF WIISARD / NIH RESCUE / NSF CAMERA /  Moore Foundation
The Center for Networked Systems  Technologies and Frameworks for Robust, Secure, and Open Networked Systems <ul><li>Diver...
Calit2 CalRADIO   Smart Radio Hardware/Software Teaching & Research Platform <ul><li>CalRADIO-I </li></ul><ul><ul><li>Digi...
Calit2 Brings Computer Scientists and Engineers  Together with Biomedical Researchers <ul><li>Some Areas of Concentration:...
In Spite of the Bubble Bursting,  Calit2 Has Partnered with over 130 Companies  Industrial Partners > $1 Million Over $80 ...
Ericsson: A Calit2 Industrial Partner  with Breadth and Depth <ul><li>Sponsored Research: Non-Exclusive Royalty Free </li>...
Broadband Depends on Where You Are <ul><li>Mobile Broadband </li></ul><ul><ul><li>0.1-0.5 Mbps </li></ul></ul><ul><li>Home...
<ul><li>September 26-30, 2005 </li></ul><ul><li>Calit2 @ University of California, San Diego </li></ul><ul><li>California ...
First Trans-Pacific Super High Definition Telepresence Meeting Using Digital Cinema 4k Streams Lays Technical Basis for Gl...
CineGrid @ iGrid2005:  Six Hours of 4K Projected in Calit2 Auditorium 4K Scientific Visualization 4K Digital Cinema 4K Dis...
Remote Interactive High Definition Video of Deep Sea Hydrothermal Vents Source John Delaney & Deborah Kelley, UWash Canadi...
e-Science Collaboratory Without Walls  Enabled by Uncompressed HD Telepresence Photo: Harry Ammons, SDSC John Delaney, PI ...
Federal Agencies Have Funded $350 Million  to Over 300 Calit2 Affiliated Grants Federal Agency  Source of Funds Creating a...
The OptIPuter Project: Creating High Resolution Portals  Over Dedicated Optical Channels to Global Science Data Picture So...
3D OptIPortals: Calit2 StarCAVE and Varrier Alpha Tests of Telepresence “Holodecks” Cluster with 30 Nvidia 5600 cards-60 G...
Marine Genome Sequencing Project –  Measuring the Genetic Diversity of Ocean Microbes Sorcerer II Data Will Double Number ...
Calit2’s Direct Access Core Architecture  Creates a SuperNetwork Metagenomics Server Traditional User Response Request Sou...
“ Instant” Global Microbial Metagenomics CyberCommunity Over 1300 Registered Users From 48 Countries
An Emerging High Performance Collaboratory for Microbial Metagenomics  NW! CICESE UW JCVI MIT SIO UCSD SDSU UIC EVL UCI Op...
Transitioning to the  “Always-On” Mobile Internet http://www.etforecasts.com/products/ES_intusersv2.htm Cellular +  WiFi
NSF-Funded ResponSphere Establishes Calit2 Project Rescue Testbeds in Irvine and in San Diego <ul><li>Gaslamp Quarter , Sa...
NSF RESCUE Strongly Coupled with NIH WIISARD Grant  W ireless  I nternet  I nformation  S ystem for Medic a l  R esponse i...
Calit2’s WIISARD Project Has Innovatived  Wireless Systems to Support SoCal First Responders  <ul><li>Aug. 22, 2006 MMST <...
Accelerator: The Perfect Storm--   Convergence of Engineering with Bio, Physics, & IT 2 mm HP  MemorySpot Nanobio info tec...
Calit2 Materials and Devices Laboratory: “Nano3” – Science, Engineering, Medicine Nano3 Facility CALIT2.UCSD 10,000 sq. fe...
A World of Distributed Sensors Starts  with Integrated Nanosensors Ivan Schuller holding the first prototype in 2004  I. K...
President Kalam of India Believes Nanobioinfotech  is the Future for 600,000 Villages <ul><li>Interactive Knowledge System...
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Calit2 - CSE's Living Laboratory for Applications

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07.11.08
Guest Lecture
UCSD CSE 91 - Perspectives in Computer Science (Fall 07)
Title: Calit2 - CSE's Living Laboratory for Applications
La Jolla, CA

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  • Calit2 - CSE's Living Laboratory for Applications

    1. 1. Calit2 - CSE's Living Laboratory for Applications UCSD CSE 91 - Perspectives in Computer Science (Fall 2007) Calit2@ UCSD November 8, 2007 Dr. Larry Smarr Director, California Institute for Telecommunications and Information Technology Harry E. Gruber Professor, Dept. of Computer Science and Engineering Jacobs School of Engineering, UCSD
    2. 2. California’s Institutes for Science and Innovation A Bold Experiment in Collaborative Research California NanoSystems Institute UCSF UCB California Institute for Bioengineering, Biotechnology, and Quantitative Biomedical Research California Institute for Telecommunications and Information Technology Center for Information Technology Research in the Interest of Society UCSC UCD UCM www.ucop.edu/california-institutes UCSB UCLA UCI UCSD
    3. 3. Scenarios in This New World <ul><li>Customized medical care based on genotype plus real-time vital signs </li></ul><ul><li>Intelligent transportation systems to enable efficient traffic flow </li></ul><ul><li>Real-time environmental data collection to inform decision making and policy setting </li></ul><ul><li>Vast networked gaming environments in which to learn, communicate, work </li></ul><ul><li>Digital entertainment networks , CineGrid </li></ul>These scenarios are all based on… - integrated systems of underlying technologies - applied to real-world problems - affecting California’s economy and quality of life Source: Warren Miller, New Yorker, April 11, 1988
    4. 4. What Is Calit2? <ul><li>Research on the Future of the Internet and its Transformation of Our Society </li></ul><ul><li>Core Partnership Between UCSD and UCI </li></ul><ul><ul><li>Several Hundred Faculty </li></ul></ul><ul><ul><li>Alliances With Other Campuses </li></ul></ul><ul><li>Prototyping Of Infrastructure Through “Living Laboratories” </li></ul><ul><ul><li>From Campus to Planetary Scale </li></ul></ul><ul><ul><li>Partnerships With Multiple Levels of Government and Industry </li></ul></ul><ul><ul><li>Secret Sauce: Technical Professionals to Move Projects Forward </li></ul></ul><ul><li>Multidisciplinary Research Teams </li></ul><ul><ul><li>Faculty, Postdocs, Staff, Students </li></ul></ul><ul><ul><li>Industry Partners – </li></ul></ul><ul><ul><ul><li>From Giants to Start-up Companies </li></ul></ul></ul><ul><ul><li>Community Partners </li></ul></ul><ul><ul><ul><li>Emergency Responders </li></ul></ul></ul>Jerry Sheehan, Calit2 is Followup Person [email_address]
    5. 5. Advanced Multimedia Facilities High Definition Studio <ul><li>Audio Spatialization </li></ul><ul><li>Motion Capture </li></ul><ul><li>Gaming Lab </li></ul>Synthesis Center
    6. 6. <ul><li>Laboratories </li></ul><ul><li>Millimeter Wave </li></ul><ul><li>Microwave/PA </li></ul><ul><li>Circuit Assembly </li></ul><ul><li>Smart Room </li></ul><ul><li>Laboratories </li></ul><ul><li>Millimeter Wave </li></ul><ul><li>Microwave/PA </li></ul><ul><li>Circuits </li></ul><ul><li>Photonics </li></ul>
    7. 7. Funded Projects OptIPuter / NSF WIISARD / NIH RESCUE / NSF CAMERA / Moore Foundation
    8. 8. The Center for Networked Systems Technologies and Frameworks for Robust, Secure, and Open Networked Systems <ul><li>Diverse Research Projects </li></ul><ul><li>Multiple faculty </li></ul><ul><li>Multiple students </li></ul><ul><li>Multidisciplinary </li></ul><ul><li>CNS Research Theme </li></ul>Research Interests Project Proposals Center Faculty Member Companies
    9. 9. Calit2 CalRADIO Smart Radio Hardware/Software Teaching & Research Platform <ul><li>CalRADIO-I </li></ul><ul><ul><li>Digital Signaling Processor + ARM </li></ul></ul><ul><ul><li>Operating System </li></ul></ul><ul><ul><li>RF WiFi (802.11x) Chip Set </li></ul></ul><ul><ul><li>MAC Functionality into 'C' Code </li></ul></ul><ul><ul><li>A Test Instrument, An Access Point, And A WiFi Client </li></ul></ul><ul><li>CalRADIO-II </li></ul><ul><ul><li>Gather Requirements and Specifications </li></ul></ul><ul><ul><li>Layer 1 to Layer 7 Software Access </li></ul></ul><ul><ul><li>Several RF Front-End Modules </li></ul></ul><ul><ul><ul><li>802.11x </li></ul></ul></ul><ul><ul><ul><li>802.16 </li></ul></ul></ul><ul><ul><ul><li>Cell </li></ul></ul></ul><ul><ul><ul><li>General RF </li></ul></ul></ul>General Development Platform For Physical to Application Layers of Wireless Design http://research.calit2.net/calradio/ Physical layer Link layer Network layer Transport Session layer Presentation Application
    10. 10. Calit2 Brings Computer Scientists and Engineers Together with Biomedical Researchers <ul><li>Some Areas of Concentration: </li></ul><ul><ul><li>Algorithmic and System Biology </li></ul></ul><ul><ul><li>Metagenomics </li></ul></ul><ul><ul><li>Cancer Genomics </li></ul></ul><ul><ul><li>Human Genomic Variation and Disease </li></ul></ul><ul><ul><li>Proteomics </li></ul></ul><ul><ul><li>Mitochondrial Evolution </li></ul></ul><ul><ul><li>Computational Biology </li></ul></ul><ul><ul><li>Multi-Scale Cellular Imaging </li></ul></ul><ul><ul><li>Information Theory and Biological Systems </li></ul></ul><ul><ul><li>Telemedicine </li></ul></ul>UC San Diego UC Irvine UC Irvine
    11. 11. In Spite of the Bubble Bursting, Calit2 Has Partnered with over 130 Companies Industrial Partners > $1 Million Over $80 Million From Industry So Far Broad Range of Companies More Than 80 Have Provided Funds or In-kind
    12. 12. Ericsson: A Calit2 Industrial Partner with Breadth and Depth <ul><li>Sponsored Research: Non-Exclusive Royalty Free </li></ul><ul><ul><li>$ 6.2 Million with UC Discovery Match </li></ul></ul><ul><ul><li>17 Professors, 17 Students, 4 Post-docs </li></ul></ul><ul><li>27 Student Fellowships </li></ul><ul><li>Two Endowed Chairs; Two Faculty Fellowships </li></ul><ul><li>Collaborations </li></ul><ul><ul><li>Magnus Almgren: Taught Course in ECE </li></ul></ul><ul><ul><li>Jaap Harsten, Bluetooth Hands-On Course </li></ul></ul><ul><li>Infrastructure </li></ul><ul><ul><li>Base Stations, Always Best Connected </li></ul></ul><ul><li>Help with </li></ul><ul><ul><li>New Federal Grants: $22.5 Million </li></ul></ul><ul><ul><li>Inspired Two Startups </li></ul></ul>Microlink Ericsson UCSD
    13. 13. Broadband Depends on Where You Are <ul><li>Mobile Broadband </li></ul><ul><ul><li>0.1-0.5 Mbps </li></ul></ul><ul><li>Home Broadband </li></ul><ul><ul><li>1-5 Mbps </li></ul></ul><ul><li>University Dorm Room Broadband </li></ul><ul><ul><li>10-100 Mbps </li></ul></ul><ul><li>Calit2 Global Broadband </li></ul><ul><ul><li>1,000-10,000 Mbps </li></ul></ul>100,000 Fold Range All Here Today! “ The future is already here, it’s just not evenly distributed” William Gibson, Author of Neuromancer
    14. 14. <ul><li>September 26-30, 2005 </li></ul><ul><li>Calit2 @ University of California, San Diego </li></ul><ul><li>California Institute for Telecommunications and Information Technology </li></ul>Borderless Collaboration Between Global University Research Centers at 10Gbps T H E G L O B A L L A M B D A I N T E G R A T E D F A C I L I T Y Maxine Brown, Tom DeFanti, Co-Chairs www.igrid2005.org 100Gb of Bandwidth into the Calit2@UCSD Building More than 150Gb GLIF Transoceanic Bandwidth! 450 Attendees, 130 Participating Organizations 20 Countries Driving 49 Demonstrations 1- or 10- Gbps Per Demo i Grid 2005
    15. 15. First Trans-Pacific Super High Definition Telepresence Meeting Using Digital Cinema 4k Streams Lays Technical Basis for Global Digital Cinema Sony NTT SGI Streaming 4k with JPEG 2000 Compression ½ gigabit/sec 100 Times the Resolution of YouTube! Keio University President Anzai UCSD Chancellor Fox
    16. 16. CineGrid @ iGrid2005: Six Hours of 4K Projected in Calit2 Auditorium 4K Scientific Visualization 4K Digital Cinema 4K Distance Learning 4K Anime 4K Virtual Reality Source: Laurin Herr
    17. 17. Remote Interactive High Definition Video of Deep Sea Hydrothermal Vents Source John Delaney & Deborah Kelley, UWash Canadian-U.S. Collaboration
    18. 18. e-Science Collaboratory Without Walls Enabled by Uncompressed HD Telepresence Photo: Harry Ammons, SDSC John Delaney, PI LOOKING, Neptune May 23, 2007 1500 Mbits/sec Calit2 to UW Research Channel Over NLR
    19. 19. Federal Agencies Have Funded $350 Million to Over 300 Calit2 Affiliated Grants Federal Agency Source of Funds Creating a Rich Ecology of Basic Research 50 Grants Over $1 Million Broad Distribution of Medium and Small Grants OptIPuter
    20. 20. The OptIPuter Project: Creating High Resolution Portals Over Dedicated Optical Channels to Global Science Data Picture Source: Mark Ellisman, David Lee, Jason Leigh Calit2 (UCSD, UCI) and UIC Lead Campuses—Larry Smarr PI Univ. Partners: SDSC, USC, SDSU, NW, TA&M, UvA, SARA, KISTI, AIST Industry: IBM, Sun, Telcordia, Chiaro, Calient, Glimmerglass, Lucent $13.5M Over Five Years Scalable Adaptive Graphics Environment (SAGE)
    21. 21. 3D OptIPortals: Calit2 StarCAVE and Varrier Alpha Tests of Telepresence “Holodecks” Cluster with 30 Nvidia 5600 cards-60 GB Texture Memory, Renders Images 3,200 Times the Speed of Single PC Source: Tom DeFanti, Greg Dawe, Calit2 Connected at 20 Gb/s to CENIC, NLR, GLIF 30 HD Projectors! 15 Meyer Sound Speakers + Subwoofer Passive Polarization-- Optimized the Polarization Separation and Minimized Attenuation
    22. 22. Marine Genome Sequencing Project – Measuring the Genetic Diversity of Ocean Microbes Sorcerer II Data Will Double Number of Proteins in GenBank! Plus 155 Marine Microbial Genomes Specify Ocean Data Each Sample ~2000 Microbial Species
    23. 23. Calit2’s Direct Access Core Architecture Creates a SuperNetwork Metagenomics Server Traditional User Response Request Source: Phil Papadopoulos, SDSC, Calit2 + Web Services <ul><ul><li>Sargasso Sea Data </li></ul></ul><ul><ul><li>Sorcerer II Expedition (GOS) </li></ul></ul><ul><ul><li>JGI Community Sequencing Project </li></ul></ul><ul><ul><li>Moore Marine Microbial Project </li></ul></ul><ul><ul><li>NASA and NOAA Satellite Data </li></ul></ul><ul><ul><li>Community Microbial Metagenomics Data </li></ul></ul>Flat File Server Farm W E B PORTAL Dedicated Compute Farm (1000s of CPUs) TeraGrid: Cyberinfrastructure Backplane (scheduled activities, e.g. all by all comparison) (10,000s of CPUs) Web (other service) Local Cluster Local Environment Direct Access Lambda Cnxns Data- Base Farm 10 GigE Fabric
    24. 24. “ Instant” Global Microbial Metagenomics CyberCommunity Over 1300 Registered Users From 48 Countries
    25. 25. An Emerging High Performance Collaboratory for Microbial Metagenomics NW! CICESE UW JCVI MIT SIO UCSD SDSU UIC EVL UCI OptIPortals OptIPortal UC Davis UMich
    26. 26. Transitioning to the “Always-On” Mobile Internet http://www.etforecasts.com/products/ES_intusersv2.htm Cellular + WiFi
    27. 27. NSF-Funded ResponSphere Establishes Calit2 Project Rescue Testbeds in Irvine and in San Diego <ul><li>Gaslamp Quarter , San Diego/UCSD </li></ul><ul><ul><li>Ubiquitous Wireless Coverage in Downtown San Diego </li></ul></ul><ul><ul><li>Test Network Architecture Enhancement and New Applications </li></ul></ul><ul><li>Crisis Assessment, Mitigation, And Analysis – UCI Campus </li></ul><ul><ul><li>Field-Test and Refine Research on Information Collection, Analysis, Sharing, and Dissemination in Controlled yet Realistic Settings </li></ul></ul>www.responsphere.org Alex Hubenko Project Manager, RESCUE, ResponSphere
    28. 28. NSF RESCUE Strongly Coupled with NIH WIISARD Grant W ireless I nternet I nformation S ystem for Medic a l R esponse in D isasters First Tier Mid Tier Wireless Networks Triage Command Center Reality Flythrough Mobile Video 802.11 pulse ox Calit2 is Working Closely with the First Responder Community Les Lenert, UCSD PI
    29. 29. Calit2’s WIISARD Project Has Innovatived Wireless Systems to Support SoCal First Responders <ul><li>Aug. 22, 2006 MMST </li></ul><ul><li>Disaster Drill at </li></ul><ul><li>Calit2@UCSD Involved </li></ul><ul><li>Over 200 First Responders </li></ul>
    30. 30. Accelerator: The Perfect Storm-- Convergence of Engineering with Bio, Physics, & IT 2 mm HP MemorySpot Nanobio info technology 1000x Magnification MEMS 2 micron DNA-Conjugated Microbeads Human Adenovirus 400x Magnification NANO IBM Quantum Corral Iron Atoms on Copper 5 nanometers 400,000 x !
    31. 31. Calit2 Materials and Devices Laboratory: “Nano3” – Science, Engineering, Medicine Nano3 Facility CALIT2.UCSD 10,000 sq. feet Materials and Devices Labs Class 100/1000 Nearly 50 Academic Projects Source: Bernd Fruhberger , Calit2
    32. 32. A World of Distributed Sensors Starts with Integrated Nanosensors Ivan Schuller holding the first prototype in 2004 I. K. Schuller, A. Kummel, M. Sailor, W. Trogler, Y-H Lo Developing Multiple Nanosensors on a Single Chip, Integrated with Local Processing and Wireless Communications Technology Transfer: RedX (Explosive Sensors), RheVision (Fauvation Optics) 2006 MURI for Nanostructured Supersensors Guided wave optics Aqueous bio/chem sensors Fluidic circuit Free space optics Physical sensors Gas/chemical sensors Electronics (communication, powering)
    33. 33. President Kalam of India Believes Nanobioinfotech is the Future for 600,000 Villages <ul><li>Interactive Knowledge System </li></ul><ul><li>Convergence of Info- Nano - Bio </li></ul><ul><li>Make the Bandwidth Available with No Limits </li></ul><ul><li>PURA--Societal Grid With Electronic Connection of a Billion People </li></ul>Photo: Alan Decker, UCSD

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