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Mobile Chemistry and the SciMobileApps Wiki  Antony Williams, PhD Version: October 22 nd  2011
Mobilizing Chemistry <ul><li>We live in the time of “Generation App”  </li></ul><ul><li>Mobile devices, apps, cloud-based ...
This Presentation….segregates <ul><li>Publisher apps </li></ul><ul><li>Accessing publications </li></ul><ul><li>eBooks </l...
Scientific Publishers Apps <ul><li>Scientific publishers release apps to: </li></ul><ul><ul><li>Provide mobile access to c...
ACS Mobile iPod, iPhone, iPad and Android:  http://tinyurl.com/6fssajt
ACS Mobile iPod, iPhone, iPad and Android:  http://tinyurl.com/6fssajt
Scientific Publisher Apps (Nature) http://www.nature.com/mobileapps/
SciVerse ScienceDirect http://tinyurl.com/3czq37y
Sciverse Scopus http://www.info.sciverse.com/scopus
Science App http://www.aaas.org/news/releases/2010/1108science_app.shtml
PNAS http://tinyurl.com/3fm94op
Journal of Biological Chemistry http://tinyurl.com/3uzwaeb
RSC Mobile iPod, iPhone & iPad:  http://tinyurl.com/69phsms
Delivering Content to App http://www.digitalpc.co.uk/mobile/
Accessing Publications <ul><li>Various apps are available for accessing and searching across the literature </li></ul><ul>...
SciFinder Mobile http://www.cas.org/products/scifindr/sfmobile/
PubMed on Tap iPhone and iPad:  http://tinyurl.com/256zgnw
PubMed on Tap iPhone and iPad:  http://tinyurl.com/256zgnw
Managing Papers http://www.mekentosj.com/papers/iphone/
Papers http://www.mekentosj.com/papers/iphone/
Mendeley on iPhone http://tinyurl.com/3bv5g5m
eBooks iPad:  http://tinyurl.com/yecg69d   <ul><li>Mobile devices are ideal platforms to deliver “books” with the capabili...
 
 
Wikipedia Chemistry
Theoretical Chemistry <ul><li>Only a small number of theoretical chemistry apps are available </li></ul>
Atom in a Box iPod, iPhone and iPad:  http://tinyurl.com/69mht5f
Molsim iPod, iPhone and iPad:  http :// tinyurl.com/4yt7bn4
Data and Chemical Dictionaries <ul><li>Apps are ideal for delivering reference data </li></ul><ul><li>Public domain data h...
Wikipedia Chemistry http://tinyurl.com/3t2hqzu
EleMints http://tinyurl.com/3pbuk7t
Chemistry Dictionary iOS:  http://tinyurl.com/3lecqo3
Organic Compound Bible iPhone and iPad:  http://tinyurl.com/6eyvckj
Drugs & Medications (A-Z) iOS:  http://tinyurl.com/3dm95jw
Epocrates http://tinyurl.com/y7mjf5a
Chemical Calculators <ul><li>Basic chemical calculations are simple to deliver </li></ul><ul><ul><li>Mass calculations </l...
LabCalPro iPhone:  http://tinyurl.com/3kj7yun
DailyCalcs http:// tinyurl.com/6yw7jro
Buffers http:// tinyurl.com/6k7vk9z
Chemical Safety and Hazards <ul><li>Chemical safety data is simply data tables </li></ul><ul><li>Most safety/hazard data a...
NIOSH Chemical Hazards iPhone and iPad:  http://tinyurl.com/6xjdjqk
NIOSH Chemical Hazards iPhone and iPad:  http://tinyurl.com/6xjdjqk
Chemical Reactions <ul><li>Chemical reactions are very amenable to serving up on mobile applications </li></ul><ul><li>Wha...
Named Reactions http://www.synthetiqsolutions.com/named-reactions/
Organic Named Reactions http://tinyurl.com/3d54fvv
ReactionFlash http://tinyurl.com/3nt54w6
Reaction101 http://molmatinf.com/reaction101.html
Yield 101 http://molmatinf.com/yield101.html
Mobile Structure Drawing Apps <ul><li>Why draw structures?  </li></ul><ul><li>Structure entry as an entry point to: </li><...
Molpad on Android http://tinyurl.com/4yzceyb
ChemMobi http://tinyurl.com/3h4r2pf
ChemJuice http://tinyurl.com/43vrfzr   Linked to YouTube  Content
Mobile Molecular Datasheet Blackberry:  http://appworld.blackberry.com/webstore/content/10662
Mobile Molecular Datasheet iPhone: http://tinyurl.com/28ojyg4
MolPrime http://tinyurl.com/3plaghq
Green Solvents http://molmatinf.com/greensolvents.html   <ul><li>A reference list of solvents, with auxiliary information ...
ChemSpider Mobile
Analytical Chemistry <ul><li>Various type of analytical science can be served:  </li></ul><ul><ul><li>General capabilities...
Spectra in the hand
NMR Isotopes iPhone, iPod & iPad:  http://tinyurl.com/44498hp
Mass Spectrometry: Isotopia iPhone, iPod & iPad:  http://tinyurl.com/3hb2t54
Accurate Mass Tool iPhone, iPod & iPad:  http://tinyurl.com/3cqvqfm
LabCalPlus Ipad:  http://tinyurl.com/3pbdyjv
Bioinformatics too…GenomePad http://tinyurl.com/3o5hdq5
Large Molecules http://tinyurl.com/ylkl6pt
iKinase for iPad http://tinyurl.com/3t9oug7
iKinase for iPhone http://tinyurl.com/3kqhfln
Other Scientific Apps <ul><li>There are an abundance of other scientific apps.. </li></ul><ul><ul><li>Physics </li></ul></...
Sourcing information about SciApps http://www.scimobileapps.com/   <ul><li>An explosion of Science Apps </li></ul><ul><li>...
Why not use Wikipedia??? <ul><li>General listings of apps are strictly controlled… </li></ul>
 
The SciMobileApps Hosts <ul><li>SciMobileApps is hosted for the community by two scientists interested in how Mobile Apps ...
SciMobileApps Pages: Chemistry
SciMobileApps Wiki
SciMobile Apps Wiki
SciMobile Apps Wiki <ul><li>Request account:  Click for Link </li></ul>
Apps vs. Mobile Optimized Websites <ul><li>Apps are resident and can run without internet access (provided they are not de...
ChemSpider Website on Mobile
ChemSpider Website on Mobile
Reaction Database Look-up http://cssp.chemspider.com/
Reaction Database Look-up http://cssp.chemspider.com/
Other Resources  <ul><li>Smart Phones – A Powerful Tool in the Classroom </li></ul><ul><li>Mobile chemistry - chemistry in...
Thank you Twitter : ChemConnector Blog : www.chemconnector.com  SLIDES: www.slideshare.net/AntonyWilliams
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Mobile Chemistry and the SciMobileApps Wiki OCTOBER 2011 VERSION

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This presentation provides an overview of how Chemistry available on Mobile Services is changing. The presentation focuses on Apps for iPhone, iPad and iPod Touch with some exposure of Android applications.

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Transcript of "Mobile Chemistry and the SciMobileApps Wiki OCTOBER 2011 VERSION"

  1. 1. Mobile Chemistry and the SciMobileApps Wiki Antony Williams, PhD Version: October 22 nd 2011
  2. 2. Mobilizing Chemistry <ul><li>We live in the time of “Generation App” </li></ul><ul><li>Mobile devices, apps, cloud-based services and databases provide “Chemistry in the Hand” </li></ul><ul><li>Hundreds of apps for multiple mobile devices are appearing: iOS (iPhone, iPads etc), Android, Blackberry etc. </li></ul><ul><li>Publishers deliver content, Databases provide mobile access and hand-based calculations are expanding in number and diversity </li></ul><ul><li>It’s not just Chemistry…Science has gone Mobile.. </li></ul><ul><li>SciMobileApps Wiki indexes Mobile Science Apps </li></ul>
  3. 3. This Presentation….segregates <ul><li>Publisher apps </li></ul><ul><li>Accessing publications </li></ul><ul><li>eBooks </li></ul><ul><li>Theoretical chemistry </li></ul><ul><li>Data and chemical dictionaries </li></ul><ul><li>Chemical calculators </li></ul><ul><li>Safety and Hazards </li></ul><ul><li>Chemical Reactions </li></ul><ul><li>Structure drawing apps </li></ul><ul><li>Analytical chemistry </li></ul><ul><li>Biomolecules </li></ul>
  4. 4. Scientific Publishers Apps <ul><li>Scientific publishers release apps to: </li></ul><ul><ul><li>Provide mobile access to content </li></ul></ul><ul><ul><li>Search and deliver content to its registered users and engage other possible users </li></ul></ul><ul><ul><li>Greater accessibility means greater readership </li></ul></ul><ul><ul><li>Revenue generation UNLIKELY via sales of the Apps themselves. Revenue comes from the content – you don’t pay a website, you pay for what’s contained in the website (the content) </li></ul></ul>
  5. 5. ACS Mobile iPod, iPhone, iPad and Android: http://tinyurl.com/6fssajt
  6. 6. ACS Mobile iPod, iPhone, iPad and Android: http://tinyurl.com/6fssajt
  7. 7. Scientific Publisher Apps (Nature) http://www.nature.com/mobileapps/
  8. 8. SciVerse ScienceDirect http://tinyurl.com/3czq37y
  9. 9. Sciverse Scopus http://www.info.sciverse.com/scopus
  10. 10. Science App http://www.aaas.org/news/releases/2010/1108science_app.shtml
  11. 11. PNAS http://tinyurl.com/3fm94op
  12. 12. Journal of Biological Chemistry http://tinyurl.com/3uzwaeb
  13. 13. RSC Mobile iPod, iPhone & iPad: http://tinyurl.com/69phsms
  14. 14. Delivering Content to App http://www.digitalpc.co.uk/mobile/
  15. 15. Accessing Publications <ul><li>Various apps are available for accessing and searching across the literature </li></ul><ul><ul><li>CAS’ Scifinder Mobile </li></ul></ul><ul><ul><li>Accessing PubMed </li></ul></ul><ul><li>Apps are available for managing your own publication library – integrated to desktop applications </li></ul><ul><ul><li>Mendeley </li></ul></ul><ul><ul><li>Papers </li></ul></ul>
  16. 16. SciFinder Mobile http://www.cas.org/products/scifindr/sfmobile/
  17. 17. PubMed on Tap iPhone and iPad: http://tinyurl.com/256zgnw
  18. 18. PubMed on Tap iPhone and iPad: http://tinyurl.com/256zgnw
  19. 19. Managing Papers http://www.mekentosj.com/papers/iphone/
  20. 20. Papers http://www.mekentosj.com/papers/iphone/
  21. 21. Mendeley on iPhone http://tinyurl.com/3bv5g5m
  22. 22. eBooks iPad: http://tinyurl.com/yecg69d <ul><li>Mobile devices are ideal platforms to deliver “books” with the capabilities of “apps” </li></ul><ul><li>An ideal example of what is possible with eBooks is Theodore Gray’s “The Elements” </li></ul><ul><li>An eBook with rotatable objects, 3D stereoscopic images, videos, linked to the Wolfram Alpha computational engine and even a song… </li></ul>
  23. 25. Wikipedia Chemistry
  24. 26. Theoretical Chemistry <ul><li>Only a small number of theoretical chemistry apps are available </li></ul>
  25. 27. Atom in a Box iPod, iPhone and iPad: http://tinyurl.com/69mht5f
  26. 28. Molsim iPod, iPhone and iPad: http :// tinyurl.com/4yt7bn4
  27. 29. Data and Chemical Dictionaries <ul><li>Apps are ideal for delivering reference data </li></ul><ul><li>Public domain data has been assembled into small collections and delivered via app interfaces </li></ul><ul><li>Data collections include </li></ul><ul><ul><li>Elements </li></ul></ul><ul><ul><li>Lists of chemicals </li></ul></ul><ul><ul><li>Drugs and Medications </li></ul></ul>
  28. 30. Wikipedia Chemistry http://tinyurl.com/3t2hqzu
  29. 31. EleMints http://tinyurl.com/3pbuk7t
  30. 32. Chemistry Dictionary iOS: http://tinyurl.com/3lecqo3
  31. 33. Organic Compound Bible iPhone and iPad: http://tinyurl.com/6eyvckj
  32. 34. Drugs & Medications (A-Z) iOS: http://tinyurl.com/3dm95jw
  33. 35. Epocrates http://tinyurl.com/y7mjf5a
  34. 36. Chemical Calculators <ul><li>Basic chemical calculations are simple to deliver </li></ul><ul><ul><li>Mass calculations </li></ul></ul><ul><ul><li>Molarity </li></ul></ul><ul><ul><li>Volume </li></ul></ul><ul><ul><li>pH </li></ul></ul>
  35. 37. LabCalPro iPhone: http://tinyurl.com/3kj7yun
  36. 38. DailyCalcs http:// tinyurl.com/6yw7jro
  37. 39. Buffers http:// tinyurl.com/6k7vk9z
  38. 40. Chemical Safety and Hazards <ul><li>Chemical safety data is simply data tables </li></ul><ul><li>Most safety/hazard data are public domain and simply rewrapped for app-based delivery </li></ul>
  39. 41. NIOSH Chemical Hazards iPhone and iPad: http://tinyurl.com/6xjdjqk
  40. 42. NIOSH Chemical Hazards iPhone and iPad: http://tinyurl.com/6xjdjqk
  41. 43. Chemical Reactions <ul><li>Chemical reactions are very amenable to serving up on mobile applications </li></ul><ul><li>What is available now? </li></ul><ul><ul><li>Teaching basics of chemical reactions </li></ul></ul><ul><ul><li>Look-ups against reaction databases </li></ul></ul><ul><ul><li>Reaction mechanisms </li></ul></ul>
  42. 44. Named Reactions http://www.synthetiqsolutions.com/named-reactions/
  43. 45. Organic Named Reactions http://tinyurl.com/3d54fvv
  44. 46. ReactionFlash http://tinyurl.com/3nt54w6
  45. 47. Reaction101 http://molmatinf.com/reaction101.html
  46. 48. Yield 101 http://molmatinf.com/yield101.html
  47. 49. Mobile Structure Drawing Apps <ul><li>Why draw structures? </li></ul><ul><li>Structure entry as an entry point to: </li></ul><ul><ul><li>Calculations (formula, mass) </li></ul></ul><ul><ul><li>Predictions (local or server-based) </li></ul></ul><ul><ul><ul><li>Systematic name generation, logP, pKa, NMR prediction, etc. </li></ul></ul></ul><ul><ul><li>Database lookup </li></ul></ul><ul><ul><ul><li>On device dictionaries (because space doesn’t matter!) </li></ul></ul></ul><ul><ul><ul><li>Internet-hosted databases (because the latest content does matter) </li></ul></ul></ul>
  48. 50. Molpad on Android http://tinyurl.com/4yzceyb
  49. 51. ChemMobi http://tinyurl.com/3h4r2pf
  50. 52. ChemJuice http://tinyurl.com/43vrfzr Linked to YouTube Content
  51. 53. Mobile Molecular Datasheet Blackberry: http://appworld.blackberry.com/webstore/content/10662
  52. 54. Mobile Molecular Datasheet iPhone: http://tinyurl.com/28ojyg4
  53. 55. MolPrime http://tinyurl.com/3plaghq
  54. 56. Green Solvents http://molmatinf.com/greensolvents.html <ul><li>A reference list of solvents, with auxiliary information about their health, safety and environmental malignancy. </li></ul>
  55. 57. ChemSpider Mobile
  56. 58. Analytical Chemistry <ul><li>Various type of analytical science can be served: </li></ul><ul><ul><li>General capabilities </li></ul></ul><ul><ul><ul><li>Spectral display </li></ul></ul></ul><ul><ul><ul><li>Tables of constants </li></ul></ul></ul><ul><ul><li>NMR </li></ul></ul><ul><ul><ul><li>Active nuclei, frequencies </li></ul></ul></ul><ul><ul><ul><li>Chemical shift prediction </li></ul></ul></ul><ul><ul><li>Mass Spectrometry </li></ul></ul><ul><ul><ul><li>Mass calculation: </li></ul></ul></ul><ul><ul><li>Infrared </li></ul></ul><ul><ul><li>Others…. </li></ul></ul>
  57. 59. Spectra in the hand
  58. 60. NMR Isotopes iPhone, iPod & iPad: http://tinyurl.com/44498hp
  59. 61. Mass Spectrometry: Isotopia iPhone, iPod & iPad: http://tinyurl.com/3hb2t54
  60. 62. Accurate Mass Tool iPhone, iPod & iPad: http://tinyurl.com/3cqvqfm
  61. 63. LabCalPlus Ipad: http://tinyurl.com/3pbdyjv
  62. 64. Bioinformatics too…GenomePad http://tinyurl.com/3o5hdq5
  63. 65. Large Molecules http://tinyurl.com/ylkl6pt
  64. 66. iKinase for iPad http://tinyurl.com/3t9oug7
  65. 67. iKinase for iPhone http://tinyurl.com/3kqhfln
  66. 68. Other Scientific Apps <ul><li>There are an abundance of other scientific apps.. </li></ul><ul><ul><li>Physics </li></ul></ul><ul><ul><li>Biology </li></ul></ul><ul><ul><li>Medicine </li></ul></ul><ul><ul><li>Mathematics </li></ul></ul><ul><ul><li>Geology </li></ul></ul>
  67. 69. Sourcing information about SciApps http://www.scimobileapps.com/ <ul><li>An explosion of Science Apps </li></ul><ul><li>Different platforms, different versions </li></ul><ul><li>How do you track them all? </li></ul><ul><li>How do you search them? </li></ul><ul><li>Where can developers post information about apps? </li></ul><ul><li>iTunes does not segregate based on science! </li></ul><ul><li>Introducing the SciMobileApps Wiki … </li></ul>
  68. 70. Why not use Wikipedia??? <ul><li>General listings of apps are strictly controlled… </li></ul>
  69. 72. The SciMobileApps Hosts <ul><li>SciMobileApps is hosted for the community by two scientists interested in how Mobile Apps can contribute to the worlds of chemistry and Drug Discovery. </li></ul><ul><li>Antony Williams is a part of the online social network as ChemConnector on Wikipedia , on Twitter , on his Blog and on LinkedIn </li></ul><ul><li>Sean Ekins is a part of the online social network as CollabChem on Wikipedia , on Twitter , on his Blog and on LinkedIn </li></ul>
  70. 73. SciMobileApps Pages: Chemistry
  71. 74. SciMobileApps Wiki
  72. 75. SciMobile Apps Wiki
  73. 76. SciMobile Apps Wiki <ul><li>Request account: Click for Link </li></ul>
  74. 77. Apps vs. Mobile Optimized Websites <ul><li>Apps are resident and can run without internet access (provided they are not dependent on cloud-based content) </li></ul><ul><li>Support of apps on multiple devices can be resource intensive to support </li></ul><ul><li>Mobile Optimized Websites serve all devices, but there might still be some browser dependence </li></ul><ul><li>Can only work when there is internet access </li></ul><ul><li>Likely cheaper to deploy and support – no revenue sharing with “App Stores” </li></ul>
  75. 78. ChemSpider Website on Mobile
  76. 79. ChemSpider Website on Mobile
  77. 80. Reaction Database Look-up http://cssp.chemspider.com/
  78. 81. Reaction Database Look-up http://cssp.chemspider.com/
  79. 82. Other Resources <ul><li>Smart Phones – A Powerful Tool in the Classroom </li></ul><ul><li>Mobile chemistry - chemistry in your hands and in your face </li></ul><ul><li>Mobile apps for chemistry in the world of drug discovery </li></ul><ul><li>Slideshare presentations </li></ul><ul><ul><li>Chemistry in the hand the delivery of structure databases and spectroscopy gaming on mobile devices </li></ul></ul><ul><ul><li>Chemistry in your hand using mobile devices to access public chemistry compound data </li></ul></ul>
  80. 83. Thank you Twitter : ChemConnector Blog : www.chemconnector.com SLIDES: www.slideshare.net/AntonyWilliams
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